miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
401	-	17990	88	21.5	-25.2	AP_000312		5' arm      3' arm
371	+	23310	81	19	-25.2	AP_000315		5' arm      3' arm
403	-	20069	88	19.5	-24.9	AP_000313		5' arm      3' arm
418	-	25572	90	22	-24.8	AP_000316		5' arm      3' arm
363	+	13184	89	19.5	-24.8	AP_000307		5' arm      3' arm
345	+	4034	90	20.5	-24.8	AP_000303		5' arm      3' arm
378	+	34597	89	26.5	-24.6	AP_000333		5' arm      3' arm
355	+	8520	90	21	-24.5	AP_000304		5' arm      3' arm
424	-	36446	89	25.5	-24.3			5' arm      3' arm
417	-	25344	86	19.5	-24.11	AP_000316		5' arm      3' arm
347	+	4831	89	19	-24	AP_000303		5' arm      3' arm
400	-	17050	90	23	-24	AP_000310		5' arm      3' arm
379	-	1049	89	20.5	-23.7	AP_000299		5' arm      3' arm
359	+	11724	87	19	-23.6	AP_000306		5' arm      3' arm
351	+	6130	90	24	-23.4	AP_000304		5' arm      3' arm
395	-	15236	90	19	-23.3	AP_000308		5' arm      3' arm
381	-	5861	80	19	-23.3	AP_000304		5' arm      3' arm
420	-	26613	90	21.5	-23.2	AP_000319		5' arm      3' arm
376	+	32326	83	19.5	-23	AP_000330		5' arm      3' arm
344	+	3476	90	22.5	-23	AP_000302		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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