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| GenBank Identifier | RefSeq Acc. | Name |
| 23505445 | NC_004313.1 | Salmonella typhimurium phage ST64B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 16919 | + | 10508 | 88 | 21.5 | -30.9 | NP_700389 | 5' arm 3' arm | ||
| 16949 | - | 14073 | 89 | 22 | -28.8 | NP_700391 | 5' arm 3' arm | ||
| 16942 | - | 6806 | 89 | 19.5 | -28.3 | NP_700383 | 5' arm 3' arm | ||
| 16946 | - | 11777 | 90 | 22.5 | -28 | NP_700389 | 5' arm 3' arm | ||
| 16920 | + | 11115 | 87 | 22 | -27.1 | NP_700389 | 5' arm 3' arm | ||
| 16917 | + | 8707 | 89 | 20 | -26.9 | NP_700386 | 5' arm 3' arm | ||
| 16916 | + | 8403 | 89 | 21.5 | -26.4 | NP_700386 | 5' arm 3' arm | ||
| 16911 | + | 909 | 89 | 22.5 | -26.24 | NP_700375 | 5' arm 3' arm | ||
| 16918 | + | 10255 | 90 | 21.5 | -25.6 | NP_700389 | 5' arm 3' arm | ||
| 16934 | + | 33276 | 86 | 20.5 | -25.1 | NP_700418 | 5' arm 3' arm | ||
| 16914 | + | 6992 | 87 | 19.5 | -25 | NP_700384 | 5' arm 3' arm | ||
| 16950 | - | 14277 | 89 | 20 | -24.5 | NP_700391 | 5' arm 3' arm | ||
| 16937 | + | 34713 | 90 | 22 | -24.5 | NP_700420 | 5' arm 3' arm | ||
| 16936 | + | 34615 | 87 | 19.5 | -24.3 | NP_700420 | 5' arm 3' arm | ||
| 16932 | + | 31300 | 85 | 20.5 | -24.2 | NP_700415 | 5' arm 3' arm | ||
| 16939 | - | 1066 | 86 | 19 | -23.8 | NP_700375 | 5' arm 3' arm | ||
| 16928 | + | 27285 | 89 | 22 | -23.6 | 5' arm 3' arm | |||
| 16938 | + | 36955 | 90 | 20 | -23.6 | 5' arm 3' arm | |||
| 16952 | - | 24659 | 90 | 22 | -23.4 | NP_700406 | 5' arm 3' arm | ||
| 16951 | - | 24281 | 84 | 19.5 | -23 | NP_700405 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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