miRNA display CGI


Results 1 - 20 of 46 are showing below:
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GenBank Identifier RefSeq Acc. Name
23505445 NC_004313.1 Salmonella typhimurium phage ST64B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16939 - 1066 86 19 -23.8 NP_700375 5' arm      3' arm
16923 + 14496 90 21.5 -19.7 NP_700392 5' arm      3' arm
16925 + 17353 86 21 -22.1 NP_700397 5' arm      3' arm
16924 + 16136 90 19 -20.2 NP_700395 5' arm      3' arm
16926 + 24424 90 22.5 -20 NP_700405 5' arm      3' arm
16927 + 26381 83 22.5 -19.5 NP_700409 5' arm      3' arm
16928 + 27285 89 22 -23.6 5' arm      3' arm
16929 + 29168 90 22 -20.7 5' arm      3' arm
16932 + 31300 85 20.5 -24.2 NP_700415 5' arm      3' arm
16922 + 11829 89 19 -21 NP_700389 5' arm      3' arm
16919 + 10508 88 21.5 -30.9 NP_700389 5' arm      3' arm
16918 + 10255 90 21.5 -25.6 NP_700389 5' arm      3' arm
16911 + 909 89 22.5 -26.24 NP_700375 5' arm      3' arm
16916 + 8403 89 21.5 -26.4 NP_700386 5' arm      3' arm
16913 + 6777 89 21 -22 NP_700383 5' arm      3' arm
16917 + 8707 89 20 -26.9 NP_700386 5' arm      3' arm
16914 + 6992 87 19.5 -25 NP_700384 5' arm      3' arm
16915 + 7889 90 19 -19.8 NP_700386 5' arm      3' arm
16920 + 11115 87 22 -27.1 NP_700389 5' arm      3' arm
16921 + 11349 90 22 -21.3 NP_700389 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.