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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12415 | - | 4687 | 85 | 20.5 | -20.8 | NP_542266 | 5' arm 3' arm | ||
| 12425 | - | 9853 | 90 | 20.5 | -27.4 | NP_542274 | 5' arm 3' arm | ||
| 12329 | + | 10636 | 88 | 20.5 | -22.8 | NP_542276 | 5' arm 3' arm | ||
| 12324 | + | 4844 | 89 | 20.5 | -24.3 | NP_542267 | 5' arm 3' arm | ||
| 12321 | + | 1457 | 90 | 20.5 | -23 | NP_542261 | 5' arm 3' arm | ||
| 12473 | - | 43000 | 86 | 21 | -25.7 | NP_542313 | 5' arm 3' arm | ||
| 12436 | - | 17662 | 90 | 21 | -20.9 | NP_542283 | 5' arm 3' arm | ||
| 12437 | - | 18149 | 90 | 21 | -24.1 | NP_542284 | 5' arm 3' arm | ||
| 12335 | + | 16900 | 87 | 21 | -24.5 | 5' arm 3' arm | |||
| 12469 | - | 42250 | 86 | 21 | -24.8 | NP_542311 | 5' arm 3' arm | ||
| 12382 | + | 38577 | 84 | 21 | -20.6 | NP_542306 | 5' arm 3' arm | ||
| 12387 | + | 44025 | 90 | 21 | -24.1 | NP_542314 | 5' arm 3' arm | ||
| 12388 | + | 44438 | 90 | 21 | -22.5 | NP_542316 | 5' arm 3' arm | ||
| 12391 | + | 45151 | 86 | 21 | -25.5 | NP_542317 | 5' arm 3' arm | ||
| 12392 | + | 45257 | 90 | 21 | -23.4 | NP_542317 | 5' arm 3' arm | ||
| 12380 | + | 38108 | 90 | 21 | -20.8 | NP_542305 | 5' arm 3' arm | ||
| 12372 | + | 33556 | 87 | 21 | -19.9 | NP_542298 | 5' arm 3' arm | ||
| 12356 | + | 26466 | 90 | 21 | -24.71 | NP_542293 | 5' arm 3' arm | ||
| 12350 | + | 23822 | 90 | 21 | -21.2 | NP_542291 | 5' arm 3' arm | ||
| 12462 | - | 38148 | 90 | 21 | -25.8 | NP_542306 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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