miRNA display CGI


Results 1 - 20 of 179 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975161 NC_003309.1 Bacteriophage phiE125

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12191 + 53098 89 19 -21.9 NP_536427 5' arm      3' arm
12273 - 53160 88 19 -23 NP_536427 5' arm      3' arm
12190 + 52410 88 21.5 -21.3 NP_536425 5' arm      3' arm
12189 + 52243 90 21.5 -26.1 NP_536425 5' arm      3' arm
12271 - 52438 89 19.5 -20.1 NP_536425 5' arm      3' arm
12272 - 52588 89 21.5 -31.5 NP_536425 5' arm      3' arm
12270 - 51546 85 19 -22.2 NP_536424 5' arm      3' arm
12269 - 50606 90 20 -19.4 NP_536424 5' arm      
12187 + 49862 89 19 -25.8 NP_536423 5' arm      3' arm
12268 - 50295 90 20 -27.51 NP_536423 5' arm      3' arm
12186 + 49612 89 20 -24.1 NP_536422 5' arm      3' arm
12266 - 48268 85 21 -34.8 NP_536418 5' arm      3' arm
12185 + 48111 89 22 -19.6 NP_536418 5' arm      3' arm
12264 - 47387 87 20 -23.1 NP_536417 5' arm      3' arm
12183 + 47541 87 19 -25.6 NP_536417 5' arm      3' arm
12263 - 47029 89 21.5 -22.5 NP_536417 5' arm      3' arm
12182 + 47338 90 21.5 -24.9 NP_536417 5' arm      3' arm
12180 + 46461 89 19 -24.1 NP_536416 5' arm      3' arm
12179 + 46075 90 23 -23.2 NP_536415 5' arm      3' arm
12178 + 45713 89 21 -25.1 NP_536415 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.