miRNA display CGI


Results 41 - 60 of 179 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975161 NC_003309.1 Bacteriophage phiE125

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12164 + 38926 88 19 -22.1 NP_536403 5' arm      3' arm
12163 + 38144 87 20.5 -24.6 NP_536402 5' arm      3' arm
12252 - 37446 86 19 -26.5 NP_536400 5' arm      3' arm
12161 + 37249 88 19.5 -28.6 NP_536400 5' arm      3' arm
12251 - 37334 84 22.5 -31.5 NP_536400       3' arm
12160 + 36490 88 26 -33.1 NP_536399 5' arm      3' arm
12250 - 36575 84 19 -27.2 NP_536399       3' arm
12159 + 36394 88 19 -21.4 NP_536399 5' arm      3' arm
12249 - 35562 81 22 -29.6 NP_536398 5' arm      3' arm
12158 + 35623 89 20 -21.9 NP_536398 5' arm      3' arm
12157 + 35306 90 22 -22.5 NP_536398 5' arm      3' arm
12248 - 34518 90 19.5 -23 NP_536396 5' arm      3' arm
12155 + 34131 90 21.5 -20.9 NP_536395 5' arm      3' arm
12246 - 33546 90 19 -20.3 NP_536395 5' arm      
12247 - 33822 90 24.5 -32.3 NP_536395 5' arm      3' arm
12154 + 33591 89 20 -22.2 NP_536395 5' arm      3' arm
12150 + 32359 90 20 -25.2 NP_536394 5' arm      3' arm
12153 + 32895 90 22 -24.7 NP_536394 5' arm      3' arm
12152 + 32653 85 19.5 -22.2 NP_536394 5' arm      3' arm
12151 + 32474 88 21 -24.9 NP_536394 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.