miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12108	+	7308	87	19	-24.7	NP_536366		5' arm      3' arm
12153	+	32895	90	22	-24.7	NP_536394		5' arm      3' arm
12202	-	5274	87	19	-24.7	NP_536362		5' arm
12163	+	38144	87	20.5	-24.6	NP_536402		5' arm      3' arm
12224	-	18407	87	21.5	-24.5	NP_536377		5' arm      3' arm
12128	+	17262	79	22.5	-24.5	NP_536377		5' arm      3' arm
12099	+	2540	88	19.5	-24.47	NP_536360		5' arm      3' arm
12227	-	19921	89	20.5	-24.4	NP_536377		5' arm      3' arm
12105	+	6036	90	20	-24.3			5' arm      3' arm
12194	-	1993	90	20.5	-24.2	NP_536358		5' arm      3' arm
12235	-	25157	90	19.5	-24.2	NP_536385		5' arm      3' arm
12256	-	41763	87	20.5	-24.2			5' arm      3' arm
12213	-	10812	90	20.5	-24.2	NP_536371		5' arm      3' arm
12186	+	49612	89	20	-24.1	NP_536422		5' arm      3' arm
12255	-	40675	85	21	-24.1	NP_536407		5' arm      3' arm
12130	+	17822	90	20	-24.1	NP_536377		5' arm      3' arm
12180	+	46461	89	19	-24.1	NP_536416		5' arm      3' arm
12117	+	10924	90	24.5	-24	NP_536371		5' arm      3' arm
12162	+	37929	90	19.5	-23.9			5' arm      3' arm
12267	-	48844	84	20	-23.8			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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