miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12193	-	1776	88	20.5	-21.8	NP_536358		5' arm      3' arm
12192	-	351	88	21.5	-23.1	NP_536357		5' arm      3' arm
12191	+	53098	89	19	-21.9	NP_536427		5' arm      3' arm
12190	+	52410	88	21.5	-21.3	NP_536425		5' arm      3' arm
12189	+	52243	90	21.5	-26.1	NP_536425		5' arm      3' arm
12188	+	52024	88	19	-26.6			5' arm      3' arm
12187	+	49862	89	19	-25.8	NP_536423		5' arm      3' arm
12186	+	49612	89	20	-24.1	NP_536422		5' arm      3' arm
12185	+	48111	89	22	-19.6	NP_536418		5' arm      3' arm
12184	+	47862	89	23	-21.3			5' arm      3' arm
12183	+	47541	87	19	-25.6	NP_536417		5' arm      3' arm
12182	+	47338	90	21.5	-24.9	NP_536417		5' arm      3' arm
12181	+	46757	86	21	-23.7			5' arm      3' arm
12180	+	46461	89	19	-24.1	NP_536416		5' arm      3' arm
12179	+	46075	90	23	-23.2	NP_536415		5' arm      3' arm
12178	+	45713	89	21	-25.1	NP_536415		5' arm      3' arm
12177	+	45018	84	23	-27.8	NP_536414		5' arm      3' arm
12176	+	44380	85	20.5	-28.1	NP_536413		5' arm      3' arm
12175	+	44041	89	22	-23.8	NP_536413		5' arm      3' arm
12174	+	43836	85	20.5	-31.8	NP_536413		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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