miRNA display CGI


Results 1 - 20 of 46 are showing below:
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GenBank Identifier RefSeq Acc. Name
20065797 NC_003525.1 Stx2 converting bacteriophage I virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14657 + 15582 87 19 -34.4 NP_612918 5' arm      3' arm
14678 - 8772 90 19 -21.5 NP_612900 5' arm      3' arm
14682 - 21552 89 19 -20.52 NP_612935 5' arm      3' arm
14662 + 21200 82 19 -20.8 NP_612934 5' arm      3' arm
14679 - 9242 88 19.5 -21 NP_612902 5' arm      3' arm
14663 + 21370 88 19.5 -21.3 NP_612929 5' arm      3' arm
14692 - 56234 89 19.5 -21.81 NP_613029 5' arm      3' arm
14676 + 57371 84 19.5 -22 NP_613032 5' arm      3' arm
14656 + 12977 90 19.5 -21.5 NP_612913 5' arm      3' arm
14687 - 41395 89 19.5 -20.8 5' arm      3' arm
14671 + 46392 85 20 -23.56 NP_613004 5' arm      3' arm
14658 + 16903 89 20 -23.4 NP_612921 5' arm      3' arm
14686 - 35906 90 20 -21.1 NP_612971 5' arm      3' arm
14661 + 20093 82 20 -22 NP_612929 5' arm      3' arm
14675 + 57023 90 20 -20.8 NP_613031 5' arm      3' arm
14693 - 56563 86 20 -26.3 NP_613026 5' arm      3' arm
14665 + 26284 86 20.5 -31.6 NP_612929 5' arm      3' arm
14689 - 46595 87 20.5 -20.3 NP_613005 5' arm      3' arm
14654 + 11080 89 20.5 -21.2 NP_612910 5' arm      3' arm
14660 + 19523 86 21 -22.2 NP_612929 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.