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GenBank Identifier | RefSeq Acc. | Name |
30315794 | NC_004765.1 | Feline papillomavirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
21114 | + | 682 | 82 | 20.5 | -32 | NP_848020 | 5' arm 3' arm | ||
21113 | + | 30 | 90 | 19.5 | -26.2 | 5' arm 3' arm | |||
21115 | + | 7272 | 85 | 19 | -20.7 | NP_848025 | 5' arm 3' arm | ||
21120 | - | 5365 | 89 | 20 | -20.7 | NP_848024 | 5' arm 3' arm | ||
21119 | - | 3408 | 78 | 19 | -23 | NP_848023 | 5' arm 3' arm | ||
21117 | - | 1040 | 89 | 20 | -34.3 | NP_848021 | 5' arm 3' arm | ||
21116 | - | 115 | 88 | 20 | -27.2 | 5' arm 3' arm | |||
21118 | - | 2879 | 87 | 19 | -23.3 | NP_848022 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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