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GenBank Identifier | RefSeq Acc. | Name |
24943162 | NC_004366.1 | Tobacco bushy top virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
17262 | + | 743 | 86 | 21 | -26.7 | NP_733847 | 5' arm 3' arm | ||
17263 | + | 891 | 88 | 20.5 | -25.3 | NP_733847 | 5' arm 3' arm | ||
17264 | + | 1784 | 84 | 19.5 | -22.8 | NP_733848 | 5' arm 3' arm | ||
17265 | + | 3177 | 84 | 20 | -27.5 | NP_733850 | 5' arm 3' arm | ||
17266 | + | 3348 | 86 | 19 | -24.5 | NP_733850 | 5' arm 3' arm | ||
17267 | - | 192 | 89 | 19.5 | -25.7 | NP_733847 | 5' arm 3' arm | ||
17268 | - | 744 | 87 | 19 | -20.9 | NP_733847 | 5' arm 3' arm | ||
17269 | - | 2475 | 86 | 20.5 | -21.8 | NP_733848 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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