miRNA display CGI


Results 1 - 11 of 11 are showing below:
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GenBank Identifier RefSeq Acc. Name
23217032 NC_004194.1 Equinus papillomavirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16841 + 4354 90 24.5 -31.5 NP_694428 5' arm      3' arm
16845 - 4248 90 19.5 -25.13 NP_694428 5' arm      3' arm
16843 - 3271 88 20 -26.1 NP_694427 5' arm      3' arm
16844 - 3905 90 20 -30 NP_694428 5' arm      3' arm
16846 - 4502 90 20.5 -20.3 NP_694428 5' arm      3' arm
16848 - 6518 89 24.5 -25.6 NP_694429 5' arm      3' arm
16842 + 7269 81 19.5 -23.8 5' arm      3' arm
16838 + 1316 90 20.5 -24.5 NP_694426 5' arm      3' arm
16839 + 3133 87 21.5 -20.8 NP_694427 5' arm      3' arm
16840 + 4092 88 24 -23.5 NP_694428 5' arm      3' arm
16847 - 4687 87 19 -19.6 NP_694428 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.