miRNA display CGI


Results 1 - 16 of 16 are showing below:
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GenBank Identifier RefSeq Acc. Name
38147300 NC_005166.1 Golden shiner reovirus segment 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
23006 - 369 89 19.5 -26.3 NP_938060 5' arm      3' arm
23007 - 2138 87 23.5 -21.7 NP_938060 5' arm      3' arm
23008 - 2651 88 19 -22.7 NP_938060 5' arm      3' arm
23009 - 2292 80 19 -24.2 NP_938061 5' arm      3' arm
23010 - 266 87 22 -19.5 NP_938062 5' arm      3' arm
23011 - 2250 87 23.5 -26.9 NP_938062 5' arm      3' arm
23012 - 3136 89 20 -23.8 NP_938062 5' arm      3' arm
23013 - 1957 90 20.5 -20.5 NP_938063 5' arm      3' arm
23014 - 346 87 21.5 -25.1 NP_938064 5' arm      3' arm
23015 - 230 78 19 -20.8 NP_938065 5' arm      3' arm
23016 - 505 89 21 -21.6 5' arm      3' arm
23017 - 1270 87 21 -22.5 NP_938067 5' arm      3' arm
23018 + 1183 86 19.5 -23.4 NP_938068 5' arm      3' arm
23019 - 1214 89 19 -21.8 NP_938068 5' arm      3' arm
23020 + 485 84 19.5 -27.6 NP_938071 5' arm      3' arm
23021 - 687 90 22 -22.3 NP_938071 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.