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GenBank Identifier | RefSeq Acc. | Name |
21557564 | NC_004051.1 |
Saccharomyces cerevisiae narnavirus 20S RNA |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15614 | + | 165 | 90 | 25.5 | -30.2 | NP_660178 | 5' arm 3' arm | ||
15615 | + | 384 | 89 | 23.5 | -31.4 | NP_660178 | 5' arm 3' arm | ||
15616 | + | 548 | 88 | 23 | -26.9 | NP_660178 | 5' arm 3' arm | ||
15617 | + | 831 | 90 | 19 | -30.1 | NP_660178 | 5' arm 3' arm | ||
15618 | + | 995 | 87 | 20.5 | -19.9 | NP_660178 | 5' arm 3' arm | ||
15619 | + | 1338 | 90 | 21 | -31.7 | NP_660178 | 5' arm 3' arm | ||
15620 | + | 1621 | 78 | 21 | -26 | NP_660178 | 5' arm 3' arm | ||
15621 | + | 1916 | 90 | 21.5 | -29.7 | NP_660178 | 5' arm 3' arm | ||
15622 | + | 2165 | 87 | 19 | -27.7 | NP_660178 | 5' arm 3' arm | ||
15623 | + | 2275 | 87 | 19.5 | -24.3 | NP_660178 | 5' arm 3' arm | ||
15624 | + | 2405 | 90 | 22 | -29.9 | NP_660178 | 5' arm 3' arm | ||
15625 | - | 253 | 88 | 21 | -28.8 | NP_660178 | 5' arm 3' arm | ||
15626 | - | 719 | 90 | 23 | -22.8 | NP_660178 | 5' arm 3' arm | ||
15627 | - | 836 | 89 | 25.5 | -30.8 | NP_660178 | 5' arm 3' arm | ||
15628 | - | 1305 | 89 | 22 | -30.6 | NP_660178 | 5' arm 3' arm | ||
15629 | - | 1621 | 88 | 23 | -25.5 | NP_660178 | 5' arm 3' arm | ||
15630 | - | 2251 | 88 | 22 | -27.8 | NP_660178 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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