miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17658	-	39683	89	19.5	-34.9			5' arm      3' arm
17665	-	44598	89	21.5	-32	NP_775189		5' arm      3' arm
17591	+	3244	90	25.5	-31.1	NP_775255		5' arm      3' arm
17643	-	21868	90	19.5	-31	NP_775233		5' arm      3' arm
17613	+	20826	89	19.5	-30.3			5' arm      3' arm
17662	-	43052	89	20	-29.6	NP_775195		5' arm      3' arm
17618	+	30057	90	19.5	-28.9	NP_775217		5' arm      3' arm
17608	+	17311	90	23	-28.8	NP_775239		5' arm      3' arm
17636	-	1092	90	20	-28.7			5' arm      3' arm
17653	-	34683	74	19	-28.3	NP_775212		5' arm      3' arm
17637	-	8639	88	20.5	-28.1	NP_775251		5' arm      3' arm
17603	+	14855	90	19	-27.8	NP_775240		5' arm      3' arm
17634	+	44871	89	21	-27.6	NP_955001		5' arm      3' arm
17635	-	983	89	21	-27.3			5' arm      3' arm
17652	-	33147	89	20.5	-27	NP_775214		5' arm      3' arm
17628	+	39316	87	23	-26.4	NP_775207		5' arm      3' arm
17661	-	42737	90	22	-26.29	NP_955000		5' arm      3' arm
17644	-	23781	88	20	-26.1	NP_775230		5' arm      3' arm
17588	+	562	87	22.5	-26			5' arm      3' arm
17659	-	40959	86	19	-26	NP_775203		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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