miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17636	-	1092	90	20	-28.7			5' arm      3' arm
17601	+	13627	89	22	-20.7	NP_775242		5' arm      3' arm
17600	+	11253	80	19	-24.4	NP_775245		5' arm      3' arm
17602	+	14134	90	25	-21.9	NP_775242		5' arm      3' arm
17608	+	17311	90	23	-28.8	NP_775239		5' arm      3' arm
17605	+	15460	90	22.5	-22.7	NP_775240		5' arm      3' arm
17606	+	16878	87	22	-20.6	NP_775239		5' arm      3' arm
17604	+	15112	90	21.5	-23.8	NP_775240		5' arm      3' arm
17609	+	17506	81	21.5	-24.4	NP_775239		5' arm      3' arm
17599	+	9842	88	25.5	-24.2	NP_775247		5' arm      3' arm
17597	+	8253	90	19	-20.5	NP_775251		5' arm      3' arm
17595	+	5881	90	19	-21.5	NP_775254		5' arm      3' arm
17588	+	562	87	22.5	-26			5' arm      3' arm
17589	+	984	85	21	-25.9			5' arm      3' arm
17592	+	3575	86	20	-23.3	NP_775255		5' arm      3' arm
17590	+	1948	90	19	-23.3	NP_775257		5' arm      3' arm
17596	+	6429	90	24.5	-20.2			5' arm      3' arm
17593	+	5010	88	24	-21	NP_775254		5' arm      3' arm
17594	+	5132	87	20	-24.4	NP_775254		5' arm      3' arm
17598	+	9187	84	19.5	-20.3	NP_775249		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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