miRNA display CGI


Results 1 - 20 of 78 are showing below:
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GenBank Identifier RefSeq Acc. Name
40549402 NC_004466.2 Pseudomonas aeruginosa phage PaP3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17603 + 14855 90 19 -27.8 NP_775240 5' arm      3' arm
17659 - 40959 86 19 -26 NP_775203 5' arm      3' arm
17620 + 32975 90 19 -22.2 NP_775214 5' arm      3' arm
17619 + 30604 90 19 -22.5 NP_775217 5' arm      3' arm
17664 - 43944 88 19 -24.1 NP_775192 5' arm      3' arm
17600 + 11253 80 19 -24.4 NP_775245 5' arm      3' arm
17607 + 16980 83 19 -20.4 NP_775239 5' arm      3' arm
17597 + 8253 90 19 -20.5 NP_775251 5' arm      3' arm
17595 + 5881 90 19 -21.5 NP_775254 5' arm      3' arm
17590 + 1948 90 19 -23.3 NP_775257 5' arm      3' arm
17653 - 34683 74 19 -28.3 NP_775212 5' arm      3' arm
17612 + 19958 88 19 -22.7 NP_775238 5' arm      3' arm
17611 + 19343 86 19 -21 NP_775239 5' arm      3' arm
17656 - 35865 81 19 -20.2 NP_775211 5' arm      3' arm
17630 + 41266 88 19 -20.8 NP_775201 5' arm      3' arm
17615 + 27133 90 19.5 -22.9 NP_775225 5' arm      3' arm
17618 + 30057 90 19.5 -28.9 NP_775217 5' arm      3' arm
17598 + 9187 84 19.5 -20.3 NP_775249 5' arm      3' arm
17613 + 20826 89 19.5 -30.3 5' arm      3' arm
17626 + 38781 90 19.5 -20.3 NP_775207 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.