miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17608	+	17311	90	23	-28.8	NP_775239		5' arm      3' arm
17609	+	17506	81	21.5	-24.4	NP_775239		5' arm      3' arm
17610	+	17708	88	21.5	-21.1	NP_775239		5' arm      3' arm
17611	+	19343	86	19	-21	NP_775239		5' arm      3' arm
17612	+	19958	88	19	-22.7	NP_775238		5' arm      3' arm
17613	+	20826	89	19.5	-30.3			5' arm      3' arm
17614	+	23276	89	21	-21.6	NP_775230		5' arm      3' arm
17615	+	27133	90	19.5	-22.9	NP_775225		5' arm      3' arm
17616	+	27435	86	23.5	-22.7	NP_775225		5' arm      3' arm
17617	+	28033	90	22.5	-21.5	NP_775223		5' arm      3' arm
17618	+	30057	90	19.5	-28.9	NP_775217		5' arm      3' arm
17619	+	30604	90	19	-22.5	NP_775217		5' arm      3' arm
17620	+	32975	90	19	-22.2	NP_775214		5' arm      3' arm
17621	+	34135	89	21	-19.7	NP_775212		5' arm      3' arm
17622	+	34848	87	23	-24.5	NP_775212		5' arm      3' arm
17623	+	37166	89	20	-23.9	NP_775209		5' arm      3' arm
17624	+	38228	90	19.5	-19.6	NP_775208		5' arm      3' arm
17625	+	38445	88	21	-19.6	NP_775208		5' arm      3' arm
17626	+	38781	90	19.5	-20.3	NP_775207		5' arm      3' arm
17627	+	39138	90	19.5	-20.99	NP_775207		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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