miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13954	+	24300	86	21	-21	NP_612665		5' arm      3' arm
13955	+	25309	90	28	-23.9			5' arm      3' arm
13956	+	25574	90	19.5	-21.7	NP_612667		5' arm      3' arm
13957	+	25906	90	20.5	-24.1	NP_612667		5' arm      3' arm
13958	+	27193	87	20.5	-20.6	NP_612668		5' arm      3' arm
13959	+	27340	90	20.5	-26.2	NP_612668		5' arm      3' arm
13960	+	28804	90	19.5	-21.8	NP_612669		5' arm      3' arm
13961	+	29239	89	19.5	-22.6	NP_612669		5' arm      3' arm
13962	+	30116	89	23	-21.3	NP_612670		5' arm      3' arm
13963	+	30538	89	19.5	-23.8	NP_612670		5' arm      3' arm
13964	+	30708	88	19	-21.77			5' arm      3' arm
13965	+	30878	90	22.5	-22.8			5' arm      3' arm
13966	+	31132	85	21	-20	NP_612671		5' arm      3' arm
13967	+	31389	90	24	-24.61	NP_612671		5' arm      3' arm
13968	+	31633	90	23.5	-21.2	NP_612671		5' arm      3' arm
13969	+	32012	86	19	-25.9	NP_612671		5' arm      3' arm
13970	+	32152	90	21	-24.4	NP_612671		5' arm      3' arm
13971	+	32315	89	21.5	-19.4	NP_612671		5' arm      3' arm
13972	+	32533	90	21.5	-23.7	NP_612671		5' arm      3' arm
13973	+	32626	90	20	-24.6	NP_612671		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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