miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
14011	+	54276	89	20	-20.2	NP_612687		5' arm      3' arm
14258	+	215215	88	19	-20.2	NP_612788		5' arm      3' arm
14348	-	38939	90	19	-20.2	NP_612676		5' arm      3' arm
14256	+	214332	90	22	-20.2	NP_612787		5' arm      3' arm
14410	-	69681	90	21	-20.2	NP_612693		5' arm      3' arm
14527	-	156767	87	19	-20.2	NP_612736		5' arm      3' arm
14475	-	123932	90	22	-20.2	NP_612717		5' arm      3' arm
14177	+	152118	89	19.5	-20.2	NP_612734		5' arm      3' arm
14048	+	85954	90	19.5	-20.2	NP_612701		5' arm      3' arm
14307	-	7753	89	20	-20.2	NP_612645		5' arm      3' arm
14137	+	128820	90	22.5	-20.2	NP_612719		5' arm      3' arm
14191	+	165711	90	22.5	-20.2	NP_612738		3' arm
14101	+	111409	90	21	-20.2			5' arm      3' arm
14077	+	101291	90	22	-20.21	NP_612703		5' arm      3' arm
14219	+	179876	90	23	-20.3	NP_612751		5' arm      3' arm
14264	+	219504	88	19	-20.3	NP_612792		5' arm      3' arm
14085	+	103864	89	19.5	-20.3	NP_612703		5' arm      3' arm
14081	+	101996	90	24	-20.3	NP_612703		5' arm      3' arm
14568	-	195935	90	21	-20.3	NP_612771		5' arm      3' arm
14078	+	101396	88	20.5	-20.3	NP_612703		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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