miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13607	+	166	88	20.5	-27.4	NP_604421		5' arm      3' arm
13608	+	547	90	26.5	-31.8	NP_604422		5' arm      3' arm
13609	+	1292	89	21	-20.4	NP_604425		5' arm      3' arm
13610	+	1584	90	25	-19.9	NP_604426		5' arm      3' arm
13611	+	1758	90	21	-24.4	NP_604426		5' arm      3' arm
13612	+	1969	89	27	-24.7	NP_604426		5' arm      3' arm
13613	+	2085	90	21.5	-20.5	NP_604426		5' arm      3' arm
13614	+	2200	90	20	-23.1	NP_604426		5' arm      3' arm
13615	+	2711	90	23.5	-20.1	NP_604426		5' arm      3' arm
13616	+	2818	89	23	-20	NP_604426		5' arm      3' arm
13617	+	3336	88	20.5	-21.8	NP_604428		5' arm      3' arm
13618	+	3538	90	21.5	-21.1	NP_604428		5' arm      3' arm
13619	+	3742	86	22.5	-22.7	NP_604428		5' arm      3' arm
13620	+	4268	86	21	-21.9	NP_604429		5' arm      3' arm
13621	+	4456	90	23	-28.7	NP_604429		5' arm      3' arm
13622	+	4750	90	20.5	-28.8	NP_604429		5' arm      3' arm
13623	+	5078	88	20.5	-30.3	NP_604429		5' arm      3' arm
13624	+	5223	89	20.5	-22.4	NP_604429		5' arm      3' arm
13625	+	5339	90	20	-23.9	NP_604429		5' arm      3' arm
13626	-	386	89	19.5	-28.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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