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| GenBank Identifier | RefSeq Acc. | Name |
| 9628835 | NC_001720.1 | Fowl adenovirus A |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 4350 | + | 34005 | 90 | 19.5 | -21.1 | 5' arm 3' arm | |||
| 4377 | - | 28490 | 88 | 21.5 | -21.3 | NP_043891 | 5' arm 3' arm | ||
| 4369 | - | 24481 | 88 | 19.5 | -21.3 | NP_043889 | 5' arm 3' arm | ||
| 4378 | - | 28587 | 90 | 21.5 | -21.4 | NP_043891 | 5' arm 3' arm | ||
| 4364 | - | 20197 | 89 | 21.5 | -21.4 | NP_043886 | 5' arm 3' arm | ||
| 4381 | - | 29519 | 87 | 20.5 | -21.4 | NP_043891 | 5' arm 3' arm | ||
| 4331 | + | 10401 | 90 | 22.5 | -21.5 | NP_043879 | 5' arm 3' arm | ||
| 4336 | + | 14413 | 87 | 21 | -21.5 | NP_043881 | 5' arm 3' arm | ||
| 4347 | + | 24164 | 88 | 20.5 | -21.6 | NP_043889 | 5' arm 3' arm | ||
| 4346 | + | 23251 | 82 | 19 | -22 | 5' arm 3' arm | |||
| 4375 | - | 28222 | 90 | 22.5 | -22.3 | 5' arm 3' arm | |||
| 4324 | + | 4146 | 85 | 20.5 | -22.4 | NP_043873 | 5' arm 3' arm | ||
| 4367 | - | 23436 | 87 | 21 | -22.5 | 5' arm 3' arm | |||
| 4321 | + | 2233 | 90 | 22.5 | -22.6 | NP_043871 | 5' arm 3' arm | ||
| 4372 | - | 25941 | 90 | 20.5 | -22.7 | NP_043889 | 5' arm 3' arm | ||
| 4352 | + | 38539 | 79 | 21 | -22.8 | 5' arm 3' arm | |||
| 4388 | - | 40859 | 90 | 20 | -22.8 | NP_043904 | 5' arm 3' arm | ||
| 4328 | + | 7151 | 88 | 24.5 | -22.8 | NP_043878 | 5' arm 3' arm | ||
| 4362 | - | 19873 | 88 | 20.5 | -23.1 | NP_043886 | 5' arm 3' arm | ||
| 4344 | + | 22435 | 77 | 20 | -23.2 | NP_043888 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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