miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
924	-	11692	80	20.5	-30.6	NP_050282		5' arm      3' arm
909	+	11609	87	19	-26.9	NP_050282		5' arm      3' arm
908	+	11280	87	21	-28.8	NP_050282		5' arm      3' arm
910	+	12082	88	22	-20.5	NP_050282		5' arm      3' arm
911	+	13633	90	20	-26	NP_050283		5' arm      3' arm
925	-	13376	90	25.5	-20.9	NP_050283		5' arm      3' arm
926	-	13945	90	21.5	-22.2	NP_050283		5' arm      3' arm
927	-	16708	88	23	-26.5	NP_050284		5' arm      3' arm
929	-	17809	90	21.5	-19.6	NP_050284		5' arm      3' arm
928	-	16937	90	20	-22.9	NP_050284		5' arm      3' arm
914	+	17087	89	19.5	-21.6	NP_050284		5' arm      3' arm
915	+	17529	87	21	-24.39	NP_050284		5' arm      3' arm
931	-	20764	86	22.5	-24.2	NP_050287		5' arm      3' arm
932	-	22378	87	24	-21.2	NP_050287		5' arm      3' arm
917	+	23846	90	21	-29.2	NP_050289		5' arm      3' arm
916	+	23523	90	21.5	-22.4	NP_050289		5' arm      3' arm
933	-	28082	89	19.5	-23.7	NP_050290		5' arm      3' arm
934	-	28371	88	23.5	-21.9	NP_050291		5' arm      3' arm
935	-	28546	88	23	-21.3	NP_050291		5' arm      3' arm
918	+	28802	90	23	-25.6	NP_050291		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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