miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
30146796 NC_004751.1 Cereal yellow dwarf virus-RPV

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21081 + 668 87 20.5 -19.5 NP_840020 5' arm      3' arm
21082 + 819 90 24.5 -24.2 NP_840022 5' arm      3' arm
21083 + 5227 90 19.5 -23.9 NP_840025 5' arm      3' arm
21084 + 5359 87 21 -25.4 NP_840025 5' arm      3' arm
21085 - 692 86 20.5 -20.6 NP_840021 5' arm      3' arm
21086 - 1052 89 19.5 -22.1 NP_840022 5' arm      3' arm
21087 - 1830 90 21 -21.2 NP_840021 5' arm      3' arm
21088 - 1922 87 22.5 -20.4 NP_840021 5' arm      3' arm
21089 - 2228 88 21 -26.72 NP_840022 5' arm      3' arm
21090 - 2651 87 20.5 -28.5 NP_840022 5' arm      3' arm
21091 - 3907 90 20 -20.3 NP_840023 5' arm      3' arm
21092 - 4428 90 21 -25.1 NP_840025 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.