miRNA display CGI


Results 1 - 10 of 10 are showing below:
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GenBank Identifier RefSeq Acc. Name
45476493 NC_005817.1 Sclerophthora macrospora virus A RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27001 + 114 88 20.5 -24.7 NP_995577 5' arm      3' arm
27002 + 655 88 21.5 -25.6 NP_995577 5' arm      3' arm
27003 + 913 90 21 -35.5 NP_995577 5' arm      3' arm
27004 + 2005 89 19 -27.9 NP_995578 5' arm      3' arm
27005 + 2390 90 20.5 -21 NP_995578 5' arm      3' arm
27006 - 650 89 23 -21.4 NP_995577 5' arm      3' arm
27007 - 1004 89 20.5 -36.8 NP_995577 5' arm      3' arm
27008 - 2091 85 19.5 -22.1 NP_995577 5' arm      3' arm
27009 + 93 88 26.5 -25.2 NP_995579 5' arm      3' arm
27010 + 551 89 20 -25 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.