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GenBank Identifier | RefSeq Acc. | Name |
20260798 | NC_003693.1 | Beet ringspot virus RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15004 | + | 579 | 85 | 19.5 | -19.96 | NP_620112 | 5' arm 3' arm | ||
15005 | + | 825 | 87 | 20.5 | -28.2 | NP_620112 | 5' arm 3' arm | ||
15006 | + | 6960 | 89 | 19 | -24.4 | NP_620112 | 5' arm 3' arm | ||
15007 | - | 1225 | 79 | 19.5 | -21.2 | NP_620112 | 5' arm 3' arm | ||
15008 | + | 338 | 89 | 20 | -24.5 | NP_620113 | 5' arm 3' arm | ||
15009 | + | 638 | 86 | 21.5 | -25.5 | NP_620113 | 5' arm 3' arm | ||
15010 | + | 1124 | 85 | 20 | -19.51 | NP_620113 | 5' arm 3' arm | ||
15011 | + | 2166 | 89 | 21.5 | -22.3 | NP_620113 | 5' arm 3' arm | ||
15012 | + | 3213 | 90 | 21 | -20.9 | NP_620113 | 5' arm 3' arm | ||
15013 | + | 3962 | 86 | 20.5 | -26.4 | NP_620113 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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