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GenBank Identifier | RefSeq Acc. | Name |
20451032 | NC_003778.1 | Chicory yellow mottle virus large satellite RNA |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15128 | + | 733 | 89 | 23.5 | -32.9 | NP_620554 | 5' arm 3' arm | ||
15127 | + | 562 | 90 | 19.5 | -37.4 | NP_620554 | 5' arm 3' arm | ||
15130 | - | 821 | 89 | 21 | -23.7 | NP_620554 | 5' arm 3' arm | ||
15129 | - | 651 | 90 | 21 | -32.5 | NP_620554 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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