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GenBank Identifier | RefSeq Acc. | Name |
21686665 | NC_004062.1 | Phthorimaea operculella granulovirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15640 | + | 97936 | 90 | 20 | -29.8 | 5' arm 3' arm | |||
15642 | - | 13005 | 90 | 21 | -29.4 | 5' arm 3' arm | |||
15641 | - | 9382 | 86 | 24.5 | -27.4 | NP_663178 | 5' arm 3' arm | ||
15638 | + | 65615 | 87 | 19.5 | -22.8 | NP_663243 | 5' arm 3' arm | ||
15643 | - | 65701 | 86 | 20 | -21.91 | NP_663243 | 5' arm 3' arm | ||
15639 | + | 71430 | 89 | 21.5 | -20.9 | NP_663247 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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