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GenBank Identifier | RefSeq Acc. | Name |
20806070 | NC_003853.1 | Pea enation mosaic virus-2 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15302 | + | 848 | 90 | 24 | -25.7 | NP_620845 | 5' arm 3' arm | ||
15303 | + | 2108 | 90 | 20.5 | -24 | NP_620846 | 5' arm 3' arm | ||
15304 | + | 3496 | 89 | 19 | -19.7 | NP_620848 | 5' arm 3' arm | ||
15305 | + | 4070 | 88 | 21 | -22.8 | 5' arm 3' arm | |||
15306 | - | 122 | 90 | 20 | -22.6 | NP_620845 | 5' arm 3' arm | ||
15307 | - | 717 | 84 | 21 | -19.6 | NP_620846 | 5' arm 3' arm | ||
15308 | - | 2748 | 88 | 21 | -22.4 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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