miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20806070 NC_003853.1 Pea enation mosaic virus-2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15302 + 848 90 24 -25.7 NP_620845 5' arm      3' arm
15303 + 2108 90 20.5 -24 NP_620846 5' arm      3' arm
15304 + 3496 89 19 -19.7 NP_620848 5' arm      3' arm
15305 + 4070 88 21 -22.8 5' arm      3' arm
15306 - 122 90 20 -22.6 NP_620845 5' arm      3' arm
15307 - 717 84 21 -19.6 NP_620846 5' arm      3' arm
15308 - 2748 88 21 -22.4 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.