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GenBank Identifier | RefSeq Acc. | Name |
62327008 | NC_006937.1 | Fusarium graminearum dsRNA mycovirus-1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
31711 | - | 3618 | 90 | 19.5 | -20.4 | YP_223920 | 5' arm 3' arm | ||
31706 | + | 314 | 87 | 20.5 | -21.3 | YP_223920 | 5' arm 3' arm | ||
31708 | + | 2306 | 82 | 20.5 | -26.9 | YP_223920 | 5' arm 3' arm | ||
31710 | - | 1093 | 85 | 20.5 | -23.3 | YP_223920 | 5' arm 3' arm | ||
31707 | + | 2049 | 87 | 21 | -26.1 | YP_223920 | 5' arm 3' arm | ||
31712 | - | 4963 | 89 | 22.5 | -24.7 | YP_223921 | 5' arm 3' arm | ||
31709 | + | 4875 | 89 | 26 | -32.9 | YP_223921 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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