miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
18071203 NC_003323.1 Primate T-lymphotropic virus 3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12309 + 1518 86 26 -21.8 NP_542256 5' arm      3' arm
12317 - 3502 80 19 -26.8 NP_542258 5' arm      3' arm
12315 - 2053 89 21 -30.4 NP_542256 5' arm      3' arm
12313 - 1744 86 22.5 -24 NP_542256 5' arm      3' arm
12316 - 3081 90 23 -28.1 NP_542258 5' arm      3' arm
12314 - 1944 88 25 -24.2 NP_542256 5' arm      3' arm
12318 - 6424 89 19.5 -23.9 5' arm      3' arm
12320 - 7990 90 20 -19.9 NP_542260 5' arm      3' arm
12319 - 6530 87 20.5 -21.2 5' arm      3' arm
12310 + 6338 87 20.5 -30.4 5' arm      3' arm
12311 + 7266 89 21 -20.4 NP_542259 5' arm      3' arm
12312 - 1234 88 19 -20.5 NP_542256 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.