miRNA display CGI


Results 1 - 20 of 29 are showing below:
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GenBank Identifier RefSeq Acc. Name
27151468 NC_003907.2 Vibriophage VpV262

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15393 + 6640 89 27.5 -35.5 NP_640276 5' arm      3' arm
15391 + 5513 88 21 -30.6 NP_640273 5' arm      3' arm
15389 + 935 88 20 -29.2 5' arm      3' arm
15398 + 28995 89 19 -27.7 NP_640308 5' arm      3' arm
15400 + 34760 90 19.5 -26.9 NP_640315 5' arm      3' arm
15401 + 35258 89 21.5 -25.8 NP_640315 5' arm      3' arm
15396 + 21114 86 25 -25.4 NP_640302 5' arm      3' arm
15397 + 21970 90 20 -24.8 5' arm      3' arm
15417 - 45685 87 21.5 -24.1 5' arm      3' arm
15402 + 38495 75 19.5 -23.9 NP_640319 5' arm      3' arm
15390 + 1847 90 20.5 -23.4 NP_640263 5' arm      3' arm
15411 - 25971 89 19 -23.4 NP_640308 5' arm      3' arm
15410 - 15454 89 21.5 -23.3 NP_640291 5' arm      3' arm
15412 - 27737 89 20 -23.1 NP_640308 5' arm      3' arm
15392 + 6025 81 21.5 -22.8 NP_640274 5' arm      3' arm
15409 - 9763 90 21.5 -22.7 NP_640280 5' arm      3' arm
15416 - 42606 81 20.5 -22.4 NP_640322 5' arm      3' arm
15406 - 3273 90 22 -22 NP_640268 5' arm      3' arm
15414 - 34383 90 22.5 -21.4 NP_640315 5' arm      3' arm
15413 - 31715 89 21 -20.7 NP_640313 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.