miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22005	-	60646	90	20.5	-24.1	NP_859411		5' arm      3' arm
22004	-	58431	89	23.5	-26.3	NP_859402		5' arm      3' arm
22003	-	56197	86	20	-26.3	NP_859392		5' arm      3' arm
22002	-	55868	89	19.5	-21.81	NP_859395		5' arm      3' arm
22001	-	48035	88	21.5	-20	NP_859378		5' arm      3' arm
22000	-	46258	90	20	-20.5	NP_859372		5' arm      3' arm
21999	-	41129	87	23	-26.2	NP_859361		5' arm      3' arm
21998	-	39350	89	20	-22.9	NP_859354		5' arm      3' arm
21997	-	37708	88	19	-19.8	NP_859347		5' arm      3' arm
21996	-	36046	90	20	-21.1	NP_859340		5' arm      3' arm
21995	-	31708	89	23.5	-27.6			5' arm      3' arm
21994	-	25021	90	23	-19.6	NP_859295		5' arm      3' arm
21993	-	21703	87	21.5	-25	NP_859302		5' arm      3' arm
21992	-	21454	89	19	-20.52	NP_859295		5' arm      3' arm
21991	-	20459	88	23	-30.7	NP_859299		5' arm      3' arm
21990	-	11553	89	23.5	-29.31	NP_859275		5' arm      3' arm
21989	-	9144	88	19.5	-21	NP_859265		5' arm      3' arm
21988	-	8773	90	19	-21.5	NP_859266		5' arm      3' arm
21987	-	8486	90	21	-21	NP_859267		5' arm      3' arm
21986	+	58865	86	21.5	-24.9	NP_859406		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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