miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21962	+	15484	87	19	-34.4	NP_859284		5' arm      3' arm
21970	+	26186	86	20.5	-31.6	NP_859295		5' arm      3' arm
21991	-	20459	88	23	-30.7	NP_859299		5' arm      3' arm
21973	+	28648	86	24	-29.8	NP_859317		5' arm      3' arm
21954	+	3425	89	23	-29.7			5' arm      3' arm
21990	-	11553	89	23.5	-29.31	NP_859275		5' arm      3' arm
21971	+	26384	90	23.5	-28.2	NP_859312		5' arm      3' arm
21979	+	49029	89	25	-28.1			5' arm      3' arm
21995	-	31708	89	23.5	-27.6			5' arm      3' arm
21975	+	41042	89	25.5	-27.4	NP_859361		5' arm      3' arm
21980	+	51638	87	22.5	-27.1	NP_859387		5' arm      3' arm
21977	+	45837	89	21.5	-26.6	NP_859372		5' arm      3' arm
22003	-	56197	86	20	-26.3	NP_859392		5' arm      3' arm
22004	-	58431	89	23.5	-26.3	NP_859402		5' arm      3' arm
21999	-	41129	87	23	-26.2	NP_859361		5' arm      3' arm
21958	+	8147	87	22	-26	NP_859265		5' arm      3' arm
21976	+	41751	87	21.5	-25.9	NP_859363		5' arm      3' arm
21981	+	55344	86	22	-25.44	NP_859392		5' arm      3' arm
21993	-	21703	87	21.5	-25	NP_859302		5' arm      3' arm
21986	+	58865	86	21.5	-24.9	NP_859406		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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