miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21974	+	31350	90	24	-23.8			5' arm      3' arm
21965	+	19374	90	20.5	-20.4	NP_859295		5' arm      3' arm
21966	+	19995	82	20	-22	NP_859295		5' arm      3' arm
21968	+	21272	88	19.5	-21.3	NP_859295		5' arm      3' arm
21967	+	21102	82	19	-20.8	NP_859300		5' arm      3' arm
21972	+	26603	89	28.5	-19.6	NP_859312		5' arm      3' arm
21971	+	26384	90	23.5	-28.2	NP_859312		5' arm      3' arm
21970	+	26186	86	20.5	-31.6	NP_859295		5' arm      3' arm
21973	+	28648	86	24	-29.8	NP_859317		5' arm      3' arm
21969	+	22115	88	23	-24.5	NP_859295		5' arm      3' arm
21962	+	15484	87	19	-34.4	NP_859284		5' arm      3' arm
21963	+	16805	89	20	-23.4	NP_859288		5' arm      3' arm
21955	+	4249	88	23	-24	NP_859251		5' arm      3' arm
21956	+	6798	89	23	-24.2	NP_859260		5' arm      3' arm
21957	+	7416	89	22.5	-22.3	NP_859262		5' arm      3' arm
21958	+	8147	87	22	-26	NP_859265		5' arm      3' arm
21960	+	12514	90	21	-20.6	NP_859278		5' arm      3' arm
21959	+	10982	89	20.5	-21.2	NP_859275		5' arm      3' arm
21961	+	12879	90	19.5	-21.5	NP_859279		5' arm      3' arm
21964	+	17595	84	23.5	-23.6	NP_859292		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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