miRNA display CGI


Results 21 - 40 of 52 are showing below:
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GenBank Identifier RefSeq Acc. Name
32171002 NC_004914.1 Stx2 converting bacteriophage II virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21966 + 19995 82 20 -22 NP_859295 5' arm      3' arm
21968 + 21272 88 19.5 -21.3 NP_859295 5' arm      3' arm
21965 + 19374 90 20.5 -20.4 NP_859295 5' arm      3' arm
21970 + 26186 86 20.5 -31.6 NP_859295 5' arm      3' arm
21969 + 22115 88 23 -24.5 NP_859295 5' arm      3' arm
21991 - 20459 88 23 -30.7 NP_859299 5' arm      3' arm
21967 + 21102 82 19 -20.8 NP_859300 5' arm      3' arm
21993 - 21703 87 21.5 -25 NP_859302 5' arm      3' arm
21971 + 26384 90 23.5 -28.2 NP_859312 5' arm      3' arm
21972 + 26603 89 28.5 -19.6 NP_859312 5' arm      3' arm
21973 + 28648 86 24 -29.8 NP_859317 5' arm      3' arm
21996 - 36046 90 20 -21.1 NP_859340 5' arm      3' arm
21997 - 37708 88 19 -19.8 NP_859347 5' arm      3' arm
21998 - 39350 89 20 -22.9 NP_859354 5' arm      3' arm
21999 - 41129 87 23 -26.2 NP_859361 5' arm      3' arm
21975 + 41042 89 25.5 -27.4 NP_859361 5' arm      3' arm
21976 + 41751 87 21.5 -25.9 NP_859363 5' arm      3' arm
21977 + 45837 89 21.5 -26.6 NP_859372 5' arm      3' arm
22000 - 46258 90 20 -20.5 NP_859372 5' arm      3' arm
21978 + 48148 89 21.5 -24.7 NP_859378 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.