miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21818	+	4	90	20.5	-26.6			5' arm      3' arm
21819	+	110	90	23.5	-22.2			5' arm      3' arm
21820	+	13368	86	21.5	-29.9	NP_853578		5' arm      3' arm
21821	+	16849	89	21	-23.9	NP_853583		5' arm      3' arm
21822	+	17434	87	23.5	-22.7			5' arm      3' arm
21823	+	19209	89	19.5	-21.7	NP_853587		5' arm      3' arm
21824	+	19555	90	21.5	-19.6	NP_853588		5' arm      3' arm
21825	+	27283	87	21	-24.7	NP_853595		5' arm      3' arm
21826	+	27658	88	21.5	-20.4	NP_853596		5' arm      3' arm
21827	+	31140	88	20	-22.71	NP_853597		5' arm      3' arm
21828	+	33318	89	19	-22.9	NP_853597		5' arm      3' arm
21829	+	33743	89	20	-25.4	NP_853597		5' arm      3' arm
21830	+	34184	90	23.5	-20.31	NP_853597		5' arm      3' arm
21831	+	36076	83	19.5	-23.1	NP_853601		5' arm      3' arm
21832	+	36968	89	22.5	-23.8	NP_853601		5' arm      3' arm
21833	+	37806	90	20.5	-20.6			5' arm      3' arm
21834	+	38077	90	19.5	-21.6	NP_853602		5' arm      3' arm
21835	+	39936	90	22.5	-29.4			5' arm      3' arm
21836	+	43633	85	19	-22.1			5' arm      3' arm
21837	-	7603	90	19.5	-21.7	NP_853570		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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