miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9630376 NC_001897.1 Human parechovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7157 + 1 84 26 -32.5 5' arm      3' arm
7158 + 6910 87 22 -20.4 NP_046804 5' arm      3' arm
7159 - 83 83 20 -27.4 5' arm      3' arm
7160 - 6995 85 19.5 -23.7 NP_046804 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.