miRNA display CGI


Results 1 - 20 of 53 are showing below:
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GenBank Identifier RefSeq Acc. Name
31044225 NC_004813.1 Phage phi 4795 provirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21746 + 37296 89 19 -23.3 5' arm      3' arm
21736 + 20705 87 19 -20.4 5' arm      3' arm
21750 + 38826 86 19 -23.9 5' arm      3' arm
21756 + 45494 90 19.5 -21.7 5' arm      3' arm
21757 + 47200 89 19.5 -22.3 5' arm      3' arm
21772 - 31730 90 19.5 -24.8 5' arm      3' arm
21777 - 45598 86 19.5 -25.3 5' arm      3' arm
21766 - 22371 89 19.5 -21.81 NP_851979 5' arm      3' arm
21749 + 38600 89 20 -24.5 5' arm      3' arm
21782 - 46851 90 20 -19.7 5' arm      3' arm
21748 + 38495 87 20 -21.1 5' arm      3' arm
21767 - 22700 86 20 -26.3 NP_851979 5' arm      3' arm
21733 + 12807 85 20 -23.56 NP_851964 5' arm      3' arm
21778 - 45709 90 20 -22.1 5' arm      3' arm
21755 + 44795 88 20 -24.9 5' arm      3' arm
21737 + 23507 88 20 -22 NP_851981 5' arm      3' arm
21735 + 18409 89 20 -19.6 NP_851976 5' arm      3' arm
21779 - 46233 89 20.5 -21.8 5' arm      3' arm
21738 + 23749 87 20.5 -22.7 NP_851982 5' arm      3' arm
21780 - 46452 88 20.5 -23.8 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.