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GenBank Identifier | RefSeq Acc. | Name |
33867950 | NC_005074.1 | Helicobasidium mompa No.17 dsRNA virus segment L |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22503 | + | 823 | 89 | 19.5 | -19.5 | NP_898832 | 5' arm 3' arm | ||
22504 | + | 1069 | 89 | 19 | -19.6 | NP_898832 | 5' arm 3' arm | ||
22505 | + | 1662 | 90 | 19 | -22.7 | NP_898832 | 5' arm 3' arm | ||
22506 | + | 3310 | 89 | 19 | -20.1 | NP_898833 | 5' arm 3' arm | ||
22507 | - | 652 | 89 | 20.5 | -25.2 | NP_898832 | 5' arm 3' arm | ||
22508 | - | 1515 | 85 | 19.5 | -26.7 | NP_898832 | 5' arm 3' arm | ||
22509 | - | 1691 | 89 | 21.5 | -29.6 | NP_898832 | 5' arm 3' arm | ||
22510 | - | 2556 | 84 | 19 | -23 | NP_898832 | 5' arm 3' arm | ||
22511 | - | 2631 | 73 | 20.5 | -31.74 | NP_898833 | 5' arm 3' arm | ||
22512 | - | 3159 | 90 | 22 | -24.9 | NP_898833 | 5' arm 3' arm | ||
22513 | + | 146 | 88 | 21 | -19.66 | 5' arm 3' arm | |||
22514 | + | 1243 | 89 | 20 | -22.3 | 5' arm 3' arm | |||
22515 | - | 783 | 88 | 20.5 | -20.9 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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