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GenBank Identifier | RefSeq Acc. | Name |
30018246 | NC_004723.1 | Pear latent virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
20953 | + | 1059 | 90 | 20 | -27.21 | NP_835239 | 5' arm 3' arm | ||
20954 | + | 1362 | 90 | 27 | -25.3 | NP_835239 | 5' arm 3' arm | ||
20955 | + | 3546 | 86 | 21.5 | -24.9 | NP_835241 | 5' arm 3' arm | ||
20956 | - | 1541 | 90 | 20 | -22.3 | NP_835239 | 5' arm 3' arm | ||
20957 | - | 1874 | 89 | 21.5 | -23.8 | NP_835239 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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