miRNA display CGI


Results 1 - 19 of 19 are showing below:
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GenBank Identifier RefSeq Acc. Name
21557568 NC_004050.1 Saccharomyces cerevisiae narnavirus 23S RNA 

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15595 + 1 89 19.5 -23.7 NP_660177 5' arm      3' arm
15596 + 190 89 24.5 -29 NP_660177 5' arm      3' arm
15597 + 666 88 21.5 -21.4 NP_660177 5' arm      3' arm
15598 + 983 89 22.5 -27.9 NP_660177 5' arm      3' arm
15599 + 1222 90 25 -22 NP_660177 5' arm      3' arm
15600 + 1565 85 20 -24.7 NP_660177 5' arm      3' arm
15601 + 1691 90 22 -22.2 NP_660177 5' arm      3' arm
15602 + 1808 89 19 -24 NP_660177 5' arm      3' arm
15603 + 1922 83 20 -28.6 NP_660177 5' arm      3' arm
15604 + 2032 90 23.5 -23.8 NP_660177 5' arm      3' arm
15605 + 2223 87 21.5 -29.8 NP_660177 5' arm      3' arm
15606 + 2403 89 26 -28.7 NP_660177 5' arm      3' arm
15607 - 89 88 21 -21.9 NP_660177 5' arm      3' arm
15608 - 547 78 23 -32.3 NP_660177 5' arm      3' arm
15609 - 754 86 19.5 -23.9 NP_660177 5' arm      3' arm
15610 - 1071 89 19 -23.2 NP_660177 5' arm      3' arm
15611 - 1844 87 19.5 -22.3 NP_660177 5' arm      3' arm
15612 - 1993 90 20 -32.8 NP_660177 5' arm      3' arm
15613 - 2491 89 22.5 -28 NP_660177 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.