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GenBank Identifier | RefSeq Acc. | Name |
21557568 | NC_004050.1 |
Saccharomyces cerevisiae narnavirus 23S RNA |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15595 | + | 1 | 89 | 19.5 | -23.7 | NP_660177 | 5' arm 3' arm | ||
15596 | + | 190 | 89 | 24.5 | -29 | NP_660177 | 5' arm 3' arm | ||
15597 | + | 666 | 88 | 21.5 | -21.4 | NP_660177 | 5' arm 3' arm | ||
15598 | + | 983 | 89 | 22.5 | -27.9 | NP_660177 | 5' arm 3' arm | ||
15599 | + | 1222 | 90 | 25 | -22 | NP_660177 | 5' arm 3' arm | ||
15600 | + | 1565 | 85 | 20 | -24.7 | NP_660177 | 5' arm 3' arm | ||
15601 | + | 1691 | 90 | 22 | -22.2 | NP_660177 | 5' arm 3' arm | ||
15602 | + | 1808 | 89 | 19 | -24 | NP_660177 | 5' arm 3' arm | ||
15603 | + | 1922 | 83 | 20 | -28.6 | NP_660177 | 5' arm 3' arm | ||
15604 | + | 2032 | 90 | 23.5 | -23.8 | NP_660177 | 5' arm 3' arm | ||
15605 | + | 2223 | 87 | 21.5 | -29.8 | NP_660177 | 5' arm 3' arm | ||
15606 | + | 2403 | 89 | 26 | -28.7 | NP_660177 | 5' arm 3' arm | ||
15607 | - | 89 | 88 | 21 | -21.9 | NP_660177 | 5' arm 3' arm | ||
15608 | - | 547 | 78 | 23 | -32.3 | NP_660177 | 5' arm 3' arm | ||
15609 | - | 754 | 86 | 19.5 | -23.9 | NP_660177 | 5' arm 3' arm | ||
15610 | - | 1071 | 89 | 19 | -23.2 | NP_660177 | 5' arm 3' arm | ||
15611 | - | 1844 | 87 | 19.5 | -22.3 | NP_660177 | 5' arm 3' arm | ||
15612 | - | 1993 | 90 | 20 | -32.8 | NP_660177 | 5' arm 3' arm | ||
15613 | - | 2491 | 89 | 22.5 | -28 | NP_660177 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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