miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
32469477 NC_004995.1 Pea stem necrosis virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22202 + 653 87 21 -23.5 NP_862835 5' arm      3' arm
22203 + 1484 90 22.5 -26.4 NP_862835 5' arm      3' arm
22204 + 3530 90 23 -24.5 NP_862839 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.