miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22309	-	10382	89	19	-20.2	NP_877456		5' arm      3' arm
22313	-	10939	90	24.5	-21.8	NP_877456		5' arm      3' arm
22312	-	10811	88	22	-28.5	NP_877456		5' arm      3' arm
22310	-	10492	81	19.5	-31	NP_877456		5' arm      3' arm
22247	+	11043	88	22.5	-27.5	NP_877457		5' arm      3' arm
22248	+	11538	89	21.5	-31	NP_877458		5' arm      3' arm
22318	-	13163	90	19.5	-25	NP_877458		5' arm      3' arm
22254	+	13163	90	19.5	-27.3	NP_877458		5' arm      3' arm
22250	+	11802	89	21.5	-25.9	NP_877458		5' arm      3' arm
22253	+	13016	90	21.5	-22.5	NP_877458		5' arm      3' arm
22255	+	13377	89	21.5	-22.1	NP_877458		5' arm      3' arm
22249	+	11669	90	20.5	-21.9	NP_877458		5' arm      3' arm
22251	+	11998	87	19.5	-23.9	NP_877458		5' arm      3' arm
22315	-	12240	90	19.5	-23	NP_877458		5' arm      3' arm
22314	-	11403	90	22	-21.4	NP_877458		5' arm      3' arm
22252	+	12749	88	19	-23.4	NP_877458		5' arm      3' arm
22317	-	12751	90	21	-27	NP_877458		5' arm      3' arm
22316	-	12356	89	21.5	-24.9	NP_877458		5' arm      3' arm
22319	-	13924	89	21.5	-23.6	NP_877459		5' arm      3' arm
22320	-	14743	90	20.5	-24.2	NP_877460		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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