miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22334	-	18838	89	22.5	-24.7	NP_877465		5' arm      3' arm
22373	-	38927	90	19	-24.7	NP_877482		5' arm      3' arm
22338	-	22748	90	20	-24.6	NP_877469		5' arm      3' arm
22303	-	7701	82	20	-24.6	NP_877453		5' arm      3' arm
22341	-	23581	89	21	-24.6	NP_877470		5' arm      3' arm
22322	-	15593	88	21	-24.6	NP_877461		5' arm      3' arm
22369	-	35796	90	21	-24.4	NP_877477		5' arm      3' arm
22370	-	36302	90	21.5	-24.3	NP_877477		5' arm      3' arm
22232	+	193	90	22	-24.2			5' arm      3' arm
22291	+	42298	90	22	-24.2			5' arm      3' arm
22320	-	14743	90	20.5	-24.2	NP_877460		5' arm      3' arm
22283	+	34454	89	20	-24.1	NP_877476		5' arm      3' arm
22234	+	845	90	21.5	-24.1			5' arm      3' arm
22251	+	11998	87	19.5	-23.9	NP_877458		5' arm      3' arm
22329	-	17999	90	19.5	-23.9			5' arm      3' arm
22343	-	24054	87	19	-23.9	NP_877470		5' arm      3' arm
22240	+	4073	90	20.5	-23.6	NP_877447		5' arm      3' arm
22319	-	13924	89	21.5	-23.6	NP_877459		5' arm      3' arm
22241	+	4347	89	19	-23.5	NP_877448		5' arm      3' arm
22252	+	12749	88	19	-23.4	NP_877458		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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