miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22300	-	5438	87	20.5	-25.8	NP_877450		5' arm      3' arm
22299	-	5140	90	22.5	-36.8			5' arm      3' arm
22298	-	5048	90	21	-28.4	NP_877449		5' arm      3' arm
22297	-	4479	89	19	-26.3	NP_877448		5' arm      3' arm
22296	-	4375	89	21.5	-22.9	NP_877448		5' arm      3' arm
22295	-	4157	81	20	-20.2	NP_877447		5' arm      3' arm
22294	-	3546	87	20	-25.9	NP_877445		5' arm      3' arm
22293	-	1748	87	21.5	-26.5			5' arm      3' arm
22292	-	1023	90	21.5	-21.9			5' arm      3' arm
22291	+	42298	90	22	-24.2			5' arm      3' arm
22290	+	41581	86	19	-19.8	NP_877486		5' arm      3' arm
22289	+	37292	87	20.5	-19.7	NP_877479		5' arm      3' arm
22288	+	37056	87	22	-26.4	NP_877479		5' arm      3' arm
22287	+	36899	90	20	-19.9	NP_877479		5' arm      3' arm
22286	+	36337	89	20	-30.7	NP_877478		5' arm      3' arm
22285	+	35939	90	19.5	-21.8	NP_877477		5' arm      3' arm
22284	+	35195	89	21	-23.1	NP_877476		5' arm      3' arm
22283	+	34454	89	20	-24.1	NP_877476		5' arm      3' arm
22282	+	34203	88	19.5	-19.5	NP_877476		5' arm      3' arm
22281	+	33964	81	20.5	-20.3	NP_877476		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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