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GenBank Identifier | RefSeq Acc. | Name |
9626123 | NC_001366.1 | Theilovirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
2170 | + | 619 | 87 | 19 | -19.9 | 5' arm 3' arm | |||
2171 | + | 2275 | 88 | 20.5 | -23.1 | NP_040350 | 5' arm 3' arm | ||
2172 | + | 6482 | 82 | 20 | -21.2 | NP_040350 | 5' arm 3' arm | ||
2173 | + | 7973 | 89 | 19.5 | -23.3 | 5' arm 3' arm | |||
2174 | - | 2029 | 79 | 21.5 | -22.3 | NP_040350 | 5' arm 3' arm | ||
2175 | - | 2396 | 87 | 20.5 | -23.8 | NP_040350 | 5' arm 3' arm | ||
2176 | - | 2756 | 83 | 23 | -27.5 | NP_040350 | 5' arm 3' arm | ||
2177 | - | 6962 | 89 | 20 | -25 | NP_040350 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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