miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18052	+	1784	87	23	-21	NP_817340		5' arm      3' arm
18048	+	817	89	23	-22.5			5' arm      3' arm
18050	+	1502	89	23.5	-22.4	NP_817340		5' arm      3' arm
18058	+	2964	90	24	-21.3	NP_817341		5' arm      3' arm
18053	+	1917	87	24.5	-25.6	NP_817340		5' arm      3' arm
18054	+	2068	87	20.5	-21.4	NP_817340		5' arm      3' arm
18057	+	2851	90	19.5	-23.9	NP_817341		5' arm      3' arm
18063	+	5534	90	20	-21.8	NP_817344		5' arm      3' arm
18065	+	6925	81	20.5	-24.4	NP_817347		5' arm      3' arm
18064	+	5834	88	20.5	-20.12			5' arm      3' arm
18062	+	5252	90	20.5	-26.5	NP_817344		5' arm      3' arm
18075	+	9254	89	21	-27.2	NP_817351		5' arm      3' arm
18072	+	8379	90	21.5	-19.5			5' arm      3' arm
18067	+	7316	87	22	-19.7	NP_817348		5' arm      3' arm
18070	+	7971	87	22.5	-22.1	NP_817349		5' arm      3' arm
18069	+	7744	90	22.5	-22.1	NP_817349		5' arm      3' arm
18074	+	9151	85	23	-24.3	NP_817351		5' arm      3' arm
18071	+	8081	89	23	-21.8	NP_817349		5' arm      3' arm
18066	+	7196	90	23	-22.9	NP_817348		5' arm      3' arm
18073	+	8818	89	24	-22.4	NP_817350		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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