miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18387	-	13203	89	20.5	-36			5' arm      3' arm
18336	+	63323	90	19.5	-35.3	NP_817555		5' arm      3' arm
18422	-	25553	89	23	-35.3	NP_817477		5' arm      3' arm
18335	+	63176	87	24.5	-35.1	NP_817555		5' arm      3' arm
18345	+	68579	90	26	-34.8	NP_817569		5' arm      3' arm
18263	+	9632	86	19	-34.3			5' arm      3' arm
18287	+	25465	88	20	-34.2	NP_817477		5' arm      3' arm
18431	-	30039	89	22	-34.1			5' arm      3' arm
18452	-	39381	86	24.5	-33.8	NP_817502		5' arm      3' arm
18502	-	57188	86	21.5	-32.4	NP_817542		5' arm      3' arm
18376	-	9725	88	20	-32			5' arm      3' arm
18407	-	20483	90	21	-31.8	NP_817473		5' arm      3' arm
18281	+	20439	90	19	-31.5	NP_817473		5' arm      3' arm
18416	-	22979	89	26	-31	NP_817475		5' arm      3' arm
18342	+	66973	89	23	-30.8	NP_817564		5' arm      3' arm
18535	-	74047	87	20.5	-30.5	NP_817587		5' arm      3' arm
18386	-	13026	89	25	-30.5	NP_817469		5' arm      3' arm
18347	+	69143	90	19	-30.4	NP_817573		5' arm      3' arm
18474	-	46922	79	20	-30.3	NP_817519		5' arm      3' arm
18334	+	63001	90	20.5	-30.3	NP_817554		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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