miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18265	+	11592	90	19	-24.4	NP_817468		5' arm      3' arm
18259	+	7620	90	20	-21.7	NP_817461		5' arm      3' arm
18260	+	7930	89	20	-19.4	NP_817461		5' arm      3' arm
18257	+	7000	88	19	-19.7	NP_817461		5' arm      3' arm
18266	+	12938	89	22	-30.1	NP_817469		5' arm      3' arm
18268	+	13764	85	21	-26.7	NP_817471		5' arm      3' arm
18262	+	9439	90	20.5	-20.2	NP_817462		5' arm      3' arm
18263	+	9632	86	19	-34.3			5' arm      3' arm
18264	+	11275	90	19	-23.8	NP_817467		5' arm      3' arm
18256	+	6216	89	21	-26.5	NP_817460		5' arm      3' arm
18258	+	7504	89	21.5	-23.1	NP_817461		5' arm      3' arm
18261	+	9013	89	22.5	-28.3	NP_817462		5' arm      3' arm
18251	+	1981	90	21.5	-29	NP_817457		5' arm      3' arm
18253	+	4372	88	21	-19.4	NP_817458		5' arm      3' arm
18248	+	627	90	20.5	-20.8	NP_817452		5' arm      3' arm
18254	+	4695	90	20.5	-21.4	NP_817458		5' arm      3' arm
18247	+	162	89	20	-25.2			5' arm      3' arm
18249	+	773	87	19	-20.7	NP_817453		5' arm      3' arm
18252	+	3051	90	19	-24	NP_817458		5' arm      3' arm
18255	+	5659	89	24.5	-26	NP_817460		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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